STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araGL-arabinose transport ATP-binding protein AraG; Region:COG1129G. (511 aa)    
Predicted Functional Partners:
xylH
Xylose transport system permease protein XylH; Region:COG4214G; Belongs to the binding-protein-dependent transport system permease family.
  
 0.959
rbsC
Ribose transport system permease RbsC; Region:COG1172G; Belongs to the binding-protein-dependent transport system permease family.
 
 0.888
rbsC-4
Ribose transport system permease RbsC; Region:COG1172G; Belongs to the binding-protein-dependent transport system permease family.
 
 0.877
chvE
Multiple sugar-binding periplasmic receptor ChvE; Region:COG4213G.
  
 0.829
rhaP
ABC transporter monosaccharide permease; Region:COG1172G; Belongs to the binding-protein-dependent transport system permease family.
 
 0.815
rbsB
Ribose transport system substrate-binding protein; Region:COG1879G.
 
 
 0.810
APG89362.1
Periplasmic binding protein/LacI transcriptional regulator; Region:COG1879G.
 
 
 0.765
xylH-2
Xylose transport system permease protein XylH; Region:COG4214G; Belongs to the binding-protein-dependent transport system permease family.
  
 0.765
rbsC-3
Ribose transport system permease RbsC; Region:COG1172G; Belongs to the binding-protein-dependent transport system permease family.
 
 0.762
rbsC-2
Ribose transport system permease RbsC; Region:COG1172G; Belongs to the binding-protein-dependent transport system permease family.
 
 0.712
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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