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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG92074.1Blue-light-activated histidine kinase; Region:COG2203T. (468 aa)    
Predicted Functional Partners:
phyR-2
Phyllosphere-induced regulator PhyR; Region:COG0784T.
 
 
 0.870
phyR
Phyllosphere-induced regulator PhyR; Region:COG0784T.
 
 
 0.863
rpfC
Sensory/regulatory protein RpfC; Region:COG0745TK.
 
 
 0.841
APG92131.1
Two-component response regulator protein; Region:COG0784T.
 
 
 0.813
APG90173.1
Two-component sensor histidine kinase protein; Region:COG0784T.
 
 
 0.778
APG89504.1
Response regulator receiver protein; Region:COG0784T.
 
 
 0.771
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ; Region:COG0745TK.
 
 0.768
APG91315.1
Blue-light-activated protein; Region:COG0784T.
 
 
 0.720
APG92602.1
Signaling protein; Region:COG3452T.
 
0.694
divL
Sensor protein DivL; Region:COG2205T.
 
 0.682
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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