STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phyR-2Phyllosphere-induced regulator PhyR; Region:COG0784T. (264 aa)    
Predicted Functional Partners:
APG92077.1
Hypothetical protein.
   
   0.948
APG91315.1
Blue-light-activated protein; Region:COG0784T.
  
 
 0.940
cheR
Chemotaxis protein methyltransferase CheR; Region:COG1352NT.
 
 
 0.924
fliM
Flagellar motor switch protein FliM; Region:COG1868N.
  
 
 0.923
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ; Region:COG0745TK.
  
 
 0.911
APG90096.1
Hypothetical protein.
   
   0.898
sig
RNA polymerase sigma factor; Region:COG1595K; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.897
pleC
Non-motile and phage-resistance protein PleC; Region:COG0591E.
  
 
 0.889
APG92074.1
Blue-light-activated histidine kinase; Region:COG2203T.
 
 
 0.870
pdhS
Cell-division control histidine kinase PdhS; Region:COG3170NW.
  
 
 0.838
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.