STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG92095.1ABC transporter ATP-binding protein; Region:COG1116P. (304 aa)    
Predicted Functional Partners:
APG92097.1
Nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein; Region:COG0600P.
 
  
 0.967
APG92098.1
ABC transporter permease; Region:COG0600P.
  
 0.967
APG92099.1
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein-like protein; Region:COG0715P.
 
  
 0.956
ssuC
Aliphatic sulfonates ABC transporter permease; Region:COG0600P.
  
 0.765
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA; Region:COG0167F.
 
     0.749
dht
D-hydantoinase/dihydropyrimidinase Dht; Region:COG0044F.
 
     0.684
APG92096.1
Hypothetical protein; Region:COG0456J.
  
    0.680
ssuA
Aliphatic sulfonates-binding protein SsuA; Region:COG0715P.
  
 0.660
APG89431.1
Binding-protein-dependent transport system inner membrane protein.
  
  
 0.612
APG89432.1
ABC transporter substrate-binding protein; Region:COG0715P.
  
  
 0.589
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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