STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG92098.1ABC transporter permease; Region:COG0600P. (289 aa)    
Predicted Functional Partners:
APG92095.1
ABC transporter ATP-binding protein; Region:COG1116P.
  
 0.967
APG92099.1
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein-like protein; Region:COG0715P.
 
  
 0.964
APG92097.1
Nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein; Region:COG0600P.
 
    
0.854
APG92096.1
Hypothetical protein; Region:COG0456J.
       0.796
ssuA
Aliphatic sulfonates-binding protein SsuA; Region:COG0715P.
 
  
 0.715
ssuB-2
Aliphatic sulfonates transporter ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 0.699
ssuB
Aliphatic sulfonates transporter ATP-binding protein SsuB; Region:COG1116P.
  
 0.693
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA; Region:COG0167F.
 
    0.663
dht
D-hydantoinase/dihydropyrimidinase Dht; Region:COG0044F.
 
     0.656
APG89432.1
ABC transporter substrate-binding protein; Region:COG0715P.
  
  
 0.534
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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