STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG92110.1Urease operon. (214 aa)    
Predicted Functional Partners:
APG92111.1
Urease-associated protein; Region:COG3755S.
       0.799
ureC
Urease subunit alpha; Region:COG0804E.
       0.795
ureB
Urease subunit beta; Region:COG0832E; Belongs to the urease beta subunit family.
       0.625
APG92113.1
Urease-associated protein; Region:COG3813S.
       0.584
ureA
Urease subunit gamma; Region:COG0831E; Belongs to the urease gamma subunit family.
       0.583
wcaJ
Colanic biosynthesis UDP-glucose lipid carrier transferase WcaJ; Region:COG1086MO.
  
  
 0.529
ureD
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
       0.522
APG92108.1
Peroxiredoxin in rpoN2 3'region; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
       0.467
APG90649.1
Transmembrane protein; Region:COG3307M-.
  
  
 0.404
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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