STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livFHigh-affinity branched-chain amino acid transport ATP-binding protein LivF; Region:COG0410E. (241 aa)    
Predicted Functional Partners:
braE
High-affinity branched-chain amino acid transport system permease BraE; Region:COG4177E; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
livH
High-affinity branched-chain amino acid transport system permease LivH; Region:COG0559E; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.992
livM
High-affinity branched-chain amino acid transport system permease LivM; Region:COG4177E; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
APG92653.1
ABC transporter permease; Region:COG4177E; Belongs to the binding-protein-dependent transport system permease family.
 
 0.979
APG90542.1
ABC-transporter permease protein; Region:COG0559E; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.967
APG91699.1
Branched-chain amino acid ABC transporter permease; Region:COG0559E; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.966
APG92652.1
ABC transporter permease; Region:COG0559E; Belongs to the binding-protein-dependent transport system permease family.
 
 0.961
livG-2
High-affinity branched-chain amino acid transport ATP-binding protein LivG; Region:COG0411E.
 
  
0.929
APG92123.1
Leu/Ile/Val-binding protein; Region:COG0683E.
 
  
 0.918
APG92651.1
ABC transporter ATP-binding protein; Region:COG0410E.
  
  
 
0.909
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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