STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
livHHigh-affinity branched-chain amino acid transport system permease LivH; Region:COG0559E; Belongs to the binding-protein-dependent transport system permease family. (300 aa)    
Predicted Functional Partners:
livG-2
High-affinity branched-chain amino acid transport ATP-binding protein LivG; Region:COG0411E.
 
 
 0.997
braE
High-affinity branched-chain amino acid transport system permease BraE; Region:COG4177E; Belongs to the binding-protein-dependent transport system permease family.
 
0.997
APG92123.1
Leu/Ile/Val-binding protein; Region:COG0683E.
 
 
 0.993
APG92653.1
ABC transporter permease; Region:COG4177E; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
livF
High-affinity branched-chain amino acid transport ATP-binding protein LivF; Region:COG0410E.
 
 
 0.992
livM
High-affinity branched-chain amino acid transport system permease LivM; Region:COG4177E; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
livG
Branched-chain amino acid ABC transporter ATP-binding protein; Region:COG0411E.
 
 
 0.983
APG92650.1
ABC transporter ATP-binding protein; Region:COG0411E.
 
 
 0.972
braG
High-affinity branched-chain amino acid transporter ATP-binding protein BraG; Region:COG0410E.
 
 
 0.967
APG92651.1
ABC transporter ATP-binding protein; Region:COG0410E.
 
 
 0.957
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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