Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APG92138.15-aminopentanamidase / Omega amidase; Region:COG0388R. (258 aa)    
Predicted Functional Partners:
APG92139.1
Binding-protein-dependent transport system inner membrane protein; Region:COG1177E.
 
     0.865
APG92140.1
ABC transporter permease; Region:COG1176E.
 
     0.810
potA-5
Spermidine/putrescine import ATP-binding protein PotA; Region:COG3842E; Belongs to the ABC transporter superfamily.
 
   
 0.808
APG92142.1
ABC transporter substrate-binding protein; Region:COG0687E.
 
     0.662
pstB
Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
   
  
 0.554
speB-2
Agmatinase SpeB; Region:COG0010E; Belongs to the arginase family.
 
 
 0.549
mhqA
Ring-cleaving dioxygenase MhqA; Region:COG0346Q.
       0.529
dgdA
2,2-dialkylglycine decarboxylase; Region:COG0160E.
 
  
 0.497
soxA
Sarcosine oxidase subunit alpha; Region:COG0404E.
   
  
 0.475
gltB-2
Ferredoxin-dependent glutamate synthase 1; Region:COG0067E.
 
   
 0.418
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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