STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaGenoyl-CoA hydratase; Region:COG1024I. (263 aa)    
Predicted Functional Partners:
paaD
Phenylacetic acid degradation protein PaaD; Region:COG2151O.
 
 
 0.989
paaA
Phenylacetic acid degradation protein PaaA; Region:COG3396Q.
 
 
 0.989
paaC
Phenylacetic acid degradation protein PaaC; Region:COG3396Q.
 
 
 0.988
paaB
Phenylacetic acid degradation protein PaaB; Region:COG3460Q.
 
 
 0.973
fadB
enoyl-CoA hydratase FadB; Region:COG1024I; Belongs to the enoyl-CoA hydratase/isomerase family.
 
0.971
hbdA
3-hydroxybutyryl-CoA dehydrogenase; Region:COG1250I.
 
 0.971
paaN
Bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Region:COG1012C.
 
 0.970
paaE
Phenylacetic acid degradation NADH oxidoreductase PaaE; Region:COG1018C.
 
 
 0.951
APG92187.1
Ring-oxidation complex protein 1 in the phenylacetic acid catabolism pathway; Region:COG3396Q.
 
 
 0.934
paaI
Acyl-coenzyme A thioesterase PaaI; Region:COG2050Q.
 
 
 0.930
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.