STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaNBifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Region:COG1012C. (685 aa)    
Predicted Functional Partners:
paaG
enoyl-CoA hydratase; Region:COG1024I.
 
 0.970
paaE
Phenylacetic acid degradation NADH oxidoreductase PaaE; Region:COG1018C.
 
 
 0.965
paaD
Phenylacetic acid degradation protein PaaD; Region:COG2151O.
 
  
 0.964
paaA
Phenylacetic acid degradation protein PaaA; Region:COG3396Q.
 
  
 0.961
paaB
Phenylacetic acid degradation protein PaaB; Region:COG3460Q.
 
  
 0.958
paaC
Phenylacetic acid degradation protein PaaC; Region:COG3396Q.
 
  
 0.957
APG92187.1
Ring-oxidation complex protein 1 in the phenylacetic acid catabolism pathway; Region:COG3396Q.
 
  
 0.902
gltA
Citrate synthase GltA; Region:COG0372C; Belongs to the citrate synthase family.
  
 
 0.813
paaI
Acyl-coenzyme A thioesterase PaaI; Region:COG2050Q.
 
  
 0.792
APG92181.1
enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase; Region:COG1024I.
 
 0.787
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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