Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APG92211.1AAA+ class ATPase with chaperone activity; Region:COG0464MDT. (430 aa)    
Predicted Functional Partners:
tadC-2
Components of type IV pilus TadC.
 
    0.951
tadB-2
Pilus assembly protein TadB; Region:COG4965UW.
 
    0.946
cpaF-2
CpaF pilus assembly protein, ATPase CpaF; Region:COG4962UW.
 
     0.919
cpaE-2
Pilus assembly protein CpaE.
 
    0.828
cpaB-2
CpaB pilus assembly protein CpaB; Region:COG3745UW.
 
    0.762
tadC
Components of type IV pilus TadC; Region:COG2064W.
 
    0.708
tadB-3
Pilus assembly protein TadB; Region:COG4965UW.
 
    0.699
APG92215.1
Hypothetical protein.
  
    0.694
tadC-3
Components of type IV pilus TadC; Region:COG2064W.
 
    0.690
tadB
Type II/IV secretion system protein TadB, Flp pilus assembly protein TadB; Region:COG4965UW.
 
    0.664
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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