STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG92274.1Ribonuclease protein; Region:COG1295S. (295 aa)    
Predicted Functional Partners:
APG91042.1
Invasion-associated protein; Region:COG5342R.
  
     0.623
APG92275.1
Oxidoreductase YbbO; Region:COG1028IQR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.598
APG92276.1
Hypothetical protein.
       0.548
cobO-2
cob(I)yrinic acid a,c-diamide adenosyltransferase; Region:COG2096H; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.521
APG89725.1
Organic solvent tolerance protein; Region:COG1934M.
 
   
 0.501
APG89756.1
Hypothetical protein; Region:COG5568S.
  
     0.480
APG90443.1
Outer membrane protein y4fJ precursor; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
   
 0.476
APG92476.1
Integral membrane protein; Region:COG5480S.
  
     0.470
APG92278.1
Rhomboid family serine protease; Region:COG0705O.
  
  
 0.459
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.425
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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