STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG92309.1Cell division protein BolA; Region:COG0271T; Belongs to the BolA/IbaG family. (93 aa)    
Predicted Functional Partners:
grxC
Monothiol glutaredoxin; Region:COG0278O; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.883
APG92308.1
Molecuar chaperone DnaJ; Region:COG0484O.
   
   0.690
cobS
Aerobic cobaltochelatase subunit CobS; Region:COG0714R.
       0.635
cobT-2
Aerobic cobaltochelatase subunit CobT; Region:COG4547H.
       0.542
APG91365.1
Hypothetical protein; Region:COG3184S.
  
    0.515
fbcH
Cytochrome b/c1; Region:COG2857C.
  
    0.507
APG92305.1
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; Region:COG4246S.
       0.481
APG90289.1
Hybrid peroxiredoxin hyPrx5; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
  
    0.458
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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