STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG92329.1ABC transporter substrate-binding protein; Region:COG2113E. (344 aa)    
Predicted Functional Partners:
proW-4
Glycine betaine/L-proline transport system permease ProW; Region:COG4176E.
  
 0.899
proW-2
Glycine betaine/L-proline transport system permease ProW; Region:COG4176E.
  
 0.845
proW-3
Glycine betaine/L-proline transport system permease ProW; Region:COG4176E.
  
 0.842
proV-3
Glycine betaine/L-proline ABC transporter ATP-binding protein; Region:COG4175E.
 
 
 0.839
opuA
Glycine betaine transport ATP-binding protein OpuAA; Region:COG4175E.
 
 
 0.791
opuA-2
Glycine betaine transport ATP-binding protein OpuAA; Region:COG4175E.
 
 
 0.778
hutF
Formiminoglutamate deiminase; Region:COG0402FR.
  
    0.686
proV-2
Glycine betaine/L-proline ABC transporter ATP-binding protein; Region:COG4175E.
  
 0.678
hutH
Histidine ammonia-lyase HutH; Region:COG2986E.
 
  
 0.630
proV
ABC glycine betaine/L-proline transporter, ATPase subunit; Region:COG4175E.
 
 
 0.611
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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