STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG92352.1Cell division protein FtsK; Region:COG0510H. (596 aa)    
Predicted Functional Partners:
APG92355.1
Beta-xylosidase.
 
     0.876
APG92342.1
3-demethylubiquinone-9 3-methyltransferase; Region:COG2227H.
 
   
 0.781
APG92345.1
Hypothetical protein; Region:COG4641D.
  
     0.754
APG92346.1
Glycosyltransferase; Region:COG4641D.
  
     0.753
APG92347.1
Group 1 glycosyl transferase; Region:COG0438M.
 
  
 0.753
APG92344.1
Hypothetical protein; Region:COG4641D.
  
     0.748
APG92354.1
Phosphoglycerate mutase; Region:COG0406G.
 
     0.693
APG92353.1
Inositol-1-phosphate synthase; Region:COG1260I.
 
   
 0.691
rfbE
CDP-paratose 2-epimerase RfbE; Region:COG0451M.
 
     0.666
APG92349.1
UDP-glucose 4-epimerase; Region:COG0451M.
  
   
 0.663
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.