Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
proV-4Glycine betaine/proline ABC transporter (ATP-binding protein); Region:COG4175E. (362 aa)    
Predicted Functional Partners:
proW-5
Glycine betaine/L-proline transport system permease protein proW; Region:COG4176E.
 
 0.994
proW-6
Glycine betaine/L-proline transport system permease protein ProW; Region:COG4176E.
 
 0.994
proW
Glycine betaine transport system permease protein opuAB; Region:COG4176E.
 
 0.977
proW-4
Glycine betaine/L-proline transport system permease ProW; Region:COG4176E.
 
 0.977
proW-2
Glycine betaine/L-proline transport system permease ProW; Region:COG4176E.
 
 0.976
proW-3
Glycine betaine/L-proline transport system permease ProW; Region:COG4176E.
 
 0.976
opuA-3
Glycine betaine transport system permease protein OpuAB; Region:COG4176E.
 
 0.976
proX
Glycine betaine-binding periplasmic protein Flags: Precursor; Region:COG2113E.
 
 
 0.941
prox
Glycine betaine-binding periplasmic protein Flags: Precursor; Region:COG2113E.
 
 
 0.741
oppD
Oligopeptide transport ATP-binding protein OppD; Region:COG0444EP.
 
     
0.739
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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