STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bepG-2Efflux pump membrane transporter BepG; Region:COG0841V. (1058 aa)    
Predicted Functional Partners:
bepF-2
Efflux pump periplasmic linker BepF; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.965
APG92491.1
RND family efflux transporter MFP subunit; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.848
bepF
Efflux pump periplasmic linker BepF; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.847
APG91616.1
RND family efflux transporter MFP subunit; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.847
ttgA
Toluene efflux pump periplasmic linker protein TtgA; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.841
tolC
TolC outer membrane protein; Region:COG1538M.
 
 
 0.639
mdtA
Multidrug resistance protein MdtA; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.589
macA
Macrolide-specific efflux protein MacA; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.578
APG92101.1
RND family efflux transporter MFP subunit; Region:COG0845MV; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.526
APG92432.1
Beta-lactamase fold family Zn-dependent hydrolase; Region:COG2220G.
  
    0.516
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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