STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motB-2Flagellar motor protein; Region:COG1360N. (343 aa)    
Predicted Functional Partners:
motA
Motility protein A; Region:COG1291N.
  
 0.996
APG92461.1
MotA/TolQ/ExbB proton channel family protein.
 
     0.952
cheA-2
Chemotaxis protein CheA; Region:COG0643NT.
  
  
 0.945
cheR
Chemotaxis protein methyltransferase CheR; Region:COG1352NT.
 
  
 0.913
motB
Chemotaxis protein motility protein B; Region:COG1360N.
     
 0.912
flgC
Flagellar basal-body rod protein FlgC; Region:COG1558N; Belongs to the flagella basal body rod proteins family.
 
  
 0.886
flgK
Flagellar hook-associated protein FlgK; Region:COG1256N.
 
  
 0.862
cheA
Chemotaxis protein CheA; Region:COG0643NT.
  
  
 0.826
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.796
fliG
Flagellar motor switch protein FliG; Region:COG1536N.
 
  
 0.782
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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