STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG92464.1Sel1 domain-containing protein repeat-containing protein; Region:COG0790T. (380 aa)    
Predicted Functional Partners:
thiE
Thiamine-phosphate pyrophosphorylase ThiE; Region:COG0352H.
       0.840
exoR
Exopolysaccharide production negative regulator; Region:COG0790T.
  
     0.762
flgC
Flagellar basal-body rod protein FlgC; Region:COG1558N; Belongs to the flagella basal body rod proteins family.
   
 
 0.683
APG92466.1
Transmembrane protein; Region:COG0730S.
       0.577
APG91332.1
Kinesin-like protein; Region:COG1196D.
 
 
   0.538
APG91748.1
Cell division protein FtsL; Region:COG5462S.
  
     0.516
APG91970.1
Hypothetical protein; Region:COG0464MDT.
   
 0.515
ostA
Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.498
suhB
Inositol-1-monophosphatase SuhB; Region:COG0483G; Belongs to the inositol monophosphatase superfamily.
       0.485
APG91099.1
Hypothetical protein.
    
 0.484
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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