STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG92464.1Sel1 domain-containing protein repeat-containing protein; Region:COG0790T. (380 aa)    
Predicted Functional Partners:
thiE
Thiamine-phosphate pyrophosphorylase ThiE; Region:COG0352H.
       0.800
exoR
Exopolysaccharide production negative regulator; Region:COG0790T.
  
     0.762
APG91970.1
Hypothetical protein; Region:COG0464MDT.
  
 0.696
APG92466.1
Transmembrane protein; Region:COG0730S.
       0.574
ndvA
Beta-(1-->2)glucan export ATP-binding/permease protein NdvA; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
  
  0.522
APG91748.1
Cell division protein FtsL; Region:COG5462S.
  
     0.516
ostA
Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.498
msbA
Lipid A export ATP-binding/permease protein MsbA; Region:COG1132V.
  
  
  0.475
APG91332.1
Kinesin-like protein; Region:COG1196D.
 
 
 
 0.470
suhB
Inositol-1-monophosphatase SuhB; Region:COG0483G; Belongs to the inositol monophosphatase superfamily.
       0.470
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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