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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thiEThiamine-phosphate pyrophosphorylase ThiE; Region:COG0352H. (217 aa)    
Predicted Functional Partners:
APG92464.1
Sel1 domain-containing protein repeat-containing protein; Region:COG0790T.
       0.800
moeZ
Adenylyltransferase/sulfurtransferase MoeZ; Region:COG0476H.
  
  
 0.798
pstS
Phosphate-binding protein PstS; Region:COG0226P.
   
    0.663
APG90022.1
Glycosyl transferase family protein; Region:COG0463M.
  
     0.653
APG90551.1
Signal peptide protein.
  
     0.630
APG91904.1
Hypothetical protein.
  
     0.616
APG92466.1
Transmembrane protein; Region:COG0730S.
       0.590
trpE
Anthranilate synthase; Region:COG0147EH.
 
  
 0.538
APG89848.1
Succinoglycan biosynthesis protein; Region:COG1525L.
  
     0.523
fadL
Long-chain fatty acid transport protein; Region:COG2067I.
 
     0.523
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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