Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APG92482.1 | APG92484.1 | SAMCFNEI73_Ch3218 | SAMCFNEI73_Ch3220 | Oligoendopeptidase F; Region:COG1164E. | Aminotransferase, class IV; Region:COG0115EH. | 0.698 |
| APG92482.1 | pabB | SAMCFNEI73_Ch3218 | SAMCFNEI73_Ch3219 | Oligoendopeptidase F; Region:COG1164E. | Para-aminobenzoate synthase component 1; Region:COG0147EH. | 0.703 |
| APG92484.1 | APG92482.1 | SAMCFNEI73_Ch3220 | SAMCFNEI73_Ch3218 | Aminotransferase, class IV; Region:COG0115EH. | Oligoendopeptidase F; Region:COG1164E. | 0.698 |
| APG92484.1 | pabB | SAMCFNEI73_Ch3220 | SAMCFNEI73_Ch3219 | Aminotransferase, class IV; Region:COG0115EH. | Para-aminobenzoate synthase component 1; Region:COG0147EH. | 0.999 |
| APG92484.1 | trpE | SAMCFNEI73_Ch3220 | SAMCFNEI73_Ch2683 | Aminotransferase, class IV; Region:COG0115EH. | Anthranilate synthase; Region:COG0147EH. | 0.571 |
| APG92875.1 | aroC | SAMCFNEI73_Ch3625 | SAMCFNEI73_Ch0952 | Chorismate mutase; Region:COG1605E. | Chorismate synthase AroC; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.972 |
| APG92875.1 | pabB | SAMCFNEI73_Ch3625 | SAMCFNEI73_Ch3219 | Chorismate mutase; Region:COG1605E. | Para-aminobenzoate synthase component 1; Region:COG0147EH. | 0.838 |
| APG92875.1 | trpE | SAMCFNEI73_Ch3625 | SAMCFNEI73_Ch2683 | Chorismate mutase; Region:COG1605E. | Anthranilate synthase; Region:COG0147EH. | 0.950 |
| aroC | APG92875.1 | SAMCFNEI73_Ch0952 | SAMCFNEI73_Ch3625 | Chorismate synthase AroC; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Chorismate mutase; Region:COG1605E. | 0.972 |
| aroC | pabB | SAMCFNEI73_Ch0952 | SAMCFNEI73_Ch3219 | Chorismate synthase AroC; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Para-aminobenzoate synthase component 1; Region:COG0147EH. | 0.934 |
| aroC | trpA | SAMCFNEI73_Ch0952 | SAMCFNEI73_Ch0031 | Chorismate synthase AroC; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.860 |
| aroC | trpB | SAMCFNEI73_Ch0952 | SAMCFNEI73_Ch0030 | Chorismate synthase AroC; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.670 |
| aroC | trpC | SAMCFNEI73_Ch0952 | SAMCFNEI73_Ch1735 | Chorismate synthase AroC; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Indole-3-glycerol phosphate synthase TrpC; Region:COG0134E; Belongs to the TrpC family. | 0.526 |
| aroC | trpD | SAMCFNEI73_Ch0952 | SAMCFNEI73_Ch1736 | Chorismate synthase AroC; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate phosphoribosyltransferase TrpD; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.644 |
| aroC | trpE | SAMCFNEI73_Ch0952 | SAMCFNEI73_Ch2683 | Chorismate synthase AroC; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase; Region:COG0147EH. | 0.969 |
| aroC | trpF | SAMCFNEI73_Ch0952 | SAMCFNEI73_Ch0029 | Chorismate synthase AroC; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | N-(5'-phosphoribosyl)anthranilate isomerase TrpF; Region:COG0135E; Belongs to the TrpF family. | 0.428 |
| pabB | APG92482.1 | SAMCFNEI73_Ch3219 | SAMCFNEI73_Ch3218 | Para-aminobenzoate synthase component 1; Region:COG0147EH. | Oligoendopeptidase F; Region:COG1164E. | 0.703 |
| pabB | APG92484.1 | SAMCFNEI73_Ch3219 | SAMCFNEI73_Ch3220 | Para-aminobenzoate synthase component 1; Region:COG0147EH. | Aminotransferase, class IV; Region:COG0115EH. | 0.999 |
| pabB | APG92875.1 | SAMCFNEI73_Ch3219 | SAMCFNEI73_Ch3625 | Para-aminobenzoate synthase component 1; Region:COG0147EH. | Chorismate mutase; Region:COG1605E. | 0.838 |
| pabB | aroC | SAMCFNEI73_Ch3219 | SAMCFNEI73_Ch0952 | Para-aminobenzoate synthase component 1; Region:COG0147EH. | Chorismate synthase AroC; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.934 |
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