STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG92485.1GGDEF family regulator; Region:COG2199T. (316 aa)    
Predicted Functional Partners:
APG90150.1
Diguanylate cyclase; Region:COG3300T.
 
 
 0.848
APG92552.1
Transmembrane sensory box GGDEF/EAL protein; Region:COG5001T.
 
 
 0.839
APG92033.1
Signaling protein; Region:COG3300T.
 
 
 0.817
mbaA
Biofilm architecture maintenance protein MbaA; Region:COG5001T.
 
 
 0.802
APG91069.1
Transmembrane GGDEF sensory box protein; Region:COG3706TK.
 
   
 0.784
APG90331.1
GGDEF/EAL sensory box protein; Region:COG0517T.
 
  
 0.782
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
    0.615
APG92602.1
Signaling protein; Region:COG3452T.
 
 
0.573
APG92486.1
NADH dehydrogenase.
       0.551
APG90291.1
Signaling protein; Region:COG2202T.
 
 
0.550
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.