STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qmcAProtein QmcA; Region:COG0330O. (328 aa)    
Predicted Functional Partners:
APG92499.1
Activity regulator of membrane protease YbbK; Region:COG1585O.
 
  
 0.962
ftsH
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.943
APG90845.1
Rhombiod family transmembrane protein; Region:COG0705O.
   
 0.582
APG92278.1
Rhomboid family serine protease; Region:COG0705O.
   
 0.582
APG90293.1
Zinc protease; Region:COG0612R; Belongs to the peptidase M16 family.
  
 0.579
APG92497.1
Response regulator/GGDEF domain transcriptional regulator; Region:COG3275T.
  
    0.505
APG90290.1
Hypothetical protein; Region:COG1678K; Belongs to the UPF0301 (AlgH) family.
  
    0.483
gltB-2
Ferredoxin-dependent glutamate synthase 1; Region:COG0067E.
     
 0.445
APG91970.1
Hypothetical protein; Region:COG0464MDT.
   
 0.434
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.