Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APG92499.1Activity regulator of membrane protease YbbK; Region:COG1585O. (151 aa)    
Predicted Functional Partners:
qmcA
Protein QmcA; Region:COG0330O.
 
 
 0.989
cobV
Cobalamin synthase CobV; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.846
APG91682.1
Transmembrane serine protease; HflC and HflK could encode or regulate a protease.
 
 
 0.606
hflC
Protein HflC; HflC and HflK could regulate a protease.
 
 
 0.575
APG92758.1
Succinate dehydrogenase hydrophobic membrane anchor protein; Region:COG2142C.
  
     0.524
APG92497.1
Response regulator/GGDEF domain transcriptional regulator; Region:COG3275T.
  
    0.513
cobJ
precorrin-3B C(17)-methyltransferase CobJ; Region:COG1010H.
  
    0.506
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
   
    0.488
cdsA
Phosphatidate cytidylyltransferase; Region:COG0575I; Belongs to the CDS family.
   
    0.477
cobK
precorrin-6A reductase CobK; Region:COG2099H.
  
    0.467
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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