Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APG92503.1Peptidoglycan-binding protein; Region:COG2951M. (405 aa)    
Predicted Functional Partners:
APG92504.1
Periplasmic protein; Region:COG2845S.
       0.613
exoN
UTP--glucose-1-phosphate uridylyltransferase ExoN; Region:COG1210M.
 
   
 0.575
APG90971.1
Lipoprotein YgeR; Region:COG1388M.
  
  
 0.521
penA
Penicillin-binding protein 2; Region:COG0768DM.
   
 
 0.489
dacD
D-alanyl-D-alanine carboxypeptidase; Region:COG1686M; Belongs to the peptidase S11 family.
 
  
 0.472
secB
Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
     0.451
amiC
N-acetylmuramoyl-L-alanine amidase AmiC; Region:COG0860M.
 
   
 0.449
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
     
 0.419
prr
Gamma-aminobutyraldehyde dehydrogenase Prr; Region:COG1012C; Belongs to the aldehyde dehydrogenase family.
      
 0.408
dacA
D-alanyl-D-alanine carboxypeptidase; Region:COG1686M; Belongs to the peptidase S11 family.
 
  
 0.407
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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