Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APG92524.1HTH-type transcriptional regulator YafC; Region:COG0583K; Belongs to the LysR transcriptional regulatory family. (317 aa)    
Predicted Functional Partners:
dgdR-3
HTH-type transcriptional regulator DgdR; Region:COG0583K; Belongs to the LysR transcriptional regulatory family.
  
     0.662
gcvA-2
Glycine cleavage system transcriptional activator; Region:COG0583K; Belongs to the LysR transcriptional regulatory family.
  
     0.653
pecT
HTH-type transcriptional regulator PecT; Region:COG0583K; Belongs to the LysR transcriptional regulatory family.
  
     0.599
dgdR
HTH-type transcriptional regulator DgdR; Region:COG0583K; Belongs to the LysR transcriptional regulatory family.
  
     0.578
APG92525.1
Oxidoreductase YajO; Region:COG0667R.
       0.542
APG91823.1
LysR family transcriptional regulator; Region:COG0583K; Belongs to the LysR transcriptional regulatory family.
  
     0.479
APG90041.1
LysR family transcriptional regulator; Region:COG0583K; Belongs to the LysR transcriptional regulatory family.
  
     0.461
gltB-2
Ferredoxin-dependent glutamate synthase 1; Region:COG0067E.
     
 0.444
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
 
 0.416
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.