STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APG92543.1O-linked GlcNAc transferase; Region:COG0457R. (296 aa)    
Predicted Functional Partners:
ctpA
Carboxy-terminal-processing protease CtpA; Region:COG0793O; Belongs to the peptidase S41A family.
   
 
 0.804
APG89547.1
NlpC/P60 family protein; Region:COG0791M.
   
 
 0.749
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.745
APG92544.1
Hypothetical protein.
 
     0.726
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
    0.609
pdhS
Cell-division control histidine kinase PdhS; Region:COG3170NW.
  
   
 0.599
cya-21
Adenylate cyclase; Region:COG2114T.
 
   
 0.572
ostA
Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
   
 0.553
APG90483.1
Hypothetical protein.
  
     0.550
APG91659.1
Exodeoxyribonuclease V; Region:COG0507L.
 
     0.535
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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