Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APG91099.1 | abg | SAMCFNEI73_Ch1808 | SAMCFNEI73_Ch3320 | Hypothetical protein. | Beta-glucosidase Abg; Region:COG2723G. | 0.729 |
APG91440.1 | abg | SAMCFNEI73_Ch2155 | SAMCFNEI73_Ch3320 | Beta-mannosidase; Region:COG3250G. | Beta-glucosidase Abg; Region:COG2723G. | 0.435 |
APG91440.1 | ndvB | SAMCFNEI73_Ch2155 | SAMCFNEI73_Ch2299 | Beta-mannosidase; Region:COG3250G. | Protein NdvB; Region:COG3459G. | 0.442 |
APG92583.1 | abg | SAMCFNEI73_Ch3321 | SAMCFNEI73_Ch3320 | Oxidoreductase y4hM; Region:COG0673R. | Beta-glucosidase Abg; Region:COG2723G. | 0.506 |
APG92583.1 | xylA | SAMCFNEI73_Ch3321 | SAMCFNEI73_Ch3323 | Oxidoreductase y4hM; Region:COG0673R. | Xylose isomerase XylA; Region:COG2115G; Belongs to the xylose isomerase family. | 0.447 |
abg | APG91099.1 | SAMCFNEI73_Ch3320 | SAMCFNEI73_Ch1808 | Beta-glucosidase Abg; Region:COG2723G. | Hypothetical protein. | 0.729 |
abg | APG91440.1 | SAMCFNEI73_Ch3320 | SAMCFNEI73_Ch2155 | Beta-glucosidase Abg; Region:COG2723G. | Beta-mannosidase; Region:COG3250G. | 0.435 |
abg | APG92583.1 | SAMCFNEI73_Ch3320 | SAMCFNEI73_Ch3321 | Beta-glucosidase Abg; Region:COG2723G. | Oxidoreductase y4hM; Region:COG0673R. | 0.506 |
abg | aglA | SAMCFNEI73_Ch3320 | SAMCFNEI73_Ch0703 | Beta-glucosidase Abg; Region:COG2723G. | Alpha-glucosidase AglA; Region:COG0366G. | 0.931 |
abg | aglA-2 | SAMCFNEI73_Ch3320 | SAMCFNEI73_Ch2705 | Beta-glucosidase Abg; Region:COG2723G. | Alpha-glucosidase AglA; Region:COG0366G. | 0.931 |
abg | aglF | SAMCFNEI73_Ch3320 | SAMCFNEI73_Ch0701 | Beta-glucosidase Abg; Region:COG2723G. | Alpha-glucoside transport system permease protein AglF; Region:COG1175G. | 0.428 |
abg | aglG | SAMCFNEI73_Ch3320 | SAMCFNEI73_Ch0702 | Beta-glucosidase Abg; Region:COG2723G. | Alpha-glucoside transport system permease protein AglG; Region:COG0395G. | 0.438 |
abg | galM | SAMCFNEI73_Ch3320 | SAMCFNEI73_Ch3564 | Beta-glucosidase Abg; Region:COG2723G. | Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. | 0.430 |
abg | ndvB | SAMCFNEI73_Ch3320 | SAMCFNEI73_Ch2299 | Beta-glucosidase Abg; Region:COG2723G. | Protein NdvB; Region:COG3459G. | 0.511 |
abg | xylA | SAMCFNEI73_Ch3320 | SAMCFNEI73_Ch3323 | Beta-glucosidase Abg; Region:COG2723G. | Xylose isomerase XylA; Region:COG2115G; Belongs to the xylose isomerase family. | 0.421 |
aglA | abg | SAMCFNEI73_Ch0703 | SAMCFNEI73_Ch3320 | Alpha-glucosidase AglA; Region:COG0366G. | Beta-glucosidase Abg; Region:COG2723G. | 0.931 |
aglA | aglA-2 | SAMCFNEI73_Ch0703 | SAMCFNEI73_Ch2705 | Alpha-glucosidase AglA; Region:COG0366G. | Alpha-glucosidase AglA; Region:COG0366G. | 0.902 |
aglA | aglF | SAMCFNEI73_Ch0703 | SAMCFNEI73_Ch0701 | Alpha-glucosidase AglA; Region:COG0366G. | Alpha-glucoside transport system permease protein AglF; Region:COG1175G. | 0.840 |
aglA | aglG | SAMCFNEI73_Ch0703 | SAMCFNEI73_Ch0702 | Alpha-glucosidase AglA; Region:COG0366G. | Alpha-glucoside transport system permease protein AglG; Region:COG0395G. | 0.846 |
aglA | ndvB | SAMCFNEI73_Ch0703 | SAMCFNEI73_Ch2299 | Alpha-glucosidase AglA; Region:COG0366G. | Protein NdvB; Region:COG3459G. | 0.419 |
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