STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bkdBLipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex; Region:COG0508C. (424 aa)    
Predicted Functional Partners:
bkdA
2-oxoisovalerate dehydrogenase subunit alpha; Region:COG1071C.
 
 0.999
bkdA-2
2-oxoisovalerate dehydrogenase subunit beta; Region:COG0022C.
 
 0.999
lpdA-2
Dihydrolipoamide dehydrogenase; Region:COG1249C.
 0.998
lpdA
Dihydrolipoyl dehydrogenase LpdA; Region:COG1249C.
 0.989
lpdA-3
Dihydrolipoamide dehydrogenase; Region:COG1249C.
 0.989
pdhB
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
 
 0.986
sucA
2-oxoglutarate dehydrogenase E1 componentSucA; Region:COG0567C.
 
 0.985
pdhA
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
 
 0.945
pta
Phosphate acetyltransferase; Region:COG0280C.
  
 
 0.919
merA
Mercuric reductase MerA; Region:COG1249C.
 0.917
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.