STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cutMCarbon monoxide dehydrogenase; Region:COG1319C. (265 aa)    
Predicted Functional Partners:
cutL
Carbon monoxide dehydrogenase; Region:COG1529C.
 
 
 0.989
coxS
Carbon monoxide dehydrogenase; Region:COG2080C.
 
 
 0.985
APG90595.1
Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT; Region:COG2080C.
 
 
 0.961
APG90593.1
Xanthine dehydrogenase YagR molybdenum-binding subunit YagR; Region:COG1529C.
 
 
 0.921
APG91200.1
XdhC/CoxF family protein; Region:COG1975O.
 
  
 0.882
APG91199.1
XdhC/CoxI family protein; Region:COG1975O.
 
  
 0.879
APG91201.1
Molybdopterin biosynthesis enzyme; Region:COG0303H.
 
  
 0.859
APG89730.1
Carbon monoxide dehydrogenase subunit G; Region:COG3427C.
 
  
 0.820
APG91198.1
VWA containing CoxE-like protein; Region:COG3552S.
 
     0.792
APG91197.1
AAA ATPase; Region:COG0714R.
 
   
 0.773
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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