STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG92698.1Hypothetical protein; Region:COG2764R. (159 aa)    
Predicted Functional Partners:
APG89710.1
Glyoxalase family protein; Region:COG2764R.
 
     0.775
APG92522.1
Hypothetical protein.
 
     0.536
APG92699.1
Transcription regulator AsnC family; Region:COG1522K.
  
    0.535
APG91109.1
Hypothetical protein.
  
     0.492
APG91648.1
Hypothetical protein; Region:COG4312R.
 
     0.465
APG89851.1
Activator of Hsp90 ATPase 1 family protein; Region:COG3832S.
 
     0.452
cya-17
Adenylate cyclase; Region:COG1672R.
  
    0.442
APG91161.1
Hypothetical protein.
  
     0.441
APG89850.1
Transcriptional regulator protein, HxlR family; Region:COG1733K.
 
    0.409
APG91568.1
Hypothetical protein; Region:COG0593L.
  
     0.408
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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