Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APG92710.1LysR family transcriptional regulator; Region:COG0583K; Belongs to the LysR transcriptional regulatory family. (298 aa)    
Predicted Functional Partners:
fdsD
NAD-dependent formate dehydrogenase delta subunit FdsD.
 
     0.809
fdsA
NAD-dependent formate dehydrogenase subunit alpha; Region:COG3383R.
 
     0.712
fabG-2
3-oxoacyl-ACP reductase; Region:COG1028IQR.
       0.680
fdsG
NAD-dependent formate dehydrogenase gamma subunit FdsG; Region:COG1905C.
 
     0.678
fdsB
NAD-dependent formate dehydrogenase subunit beta; Region:COG1894C.
 
     0.658
fdhD
Formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.638
glpR
Glycerol-3-phosphate regulon repressor; Region:COG1349KG.
       0.445
gltB-2
Ferredoxin-dependent glutamate synthase 1; Region:COG0067E.
     
 0.444
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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