STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malFTrehalose/maltose transport system permease protein MalF; Region:COG1175G. (288 aa)    
Predicted Functional Partners:
sugB
Trehalose transport system permease protein SugB; Region:COG0395G.
 0.993
APG92718.1
Glycerol-3-phosphate and glycerol ABC transporter, periplasmic solute-binding component; Region:COG1653G.
 
 0.984
ugpC-3
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Region:COG3839G; Belongs to the ABC transporter superfamily.
 
 0.977
APG92717.1
Glycerol-3-phosphate and glycerol transport protein; Region:COG5477S.
 
    0.921
malG
Maltose transport system permease protein malG; Region:COG0395G.
 
 0.621
araQ
L-arabinose transport system permease AraQ; Region:COG0395G.
 
 
 0.602
ugpE-2
Sn-glycerol-3-phosphate transport system permease protein ugpE; Region:COG0395G.
 
 0.590
ugpE
Sn-glycerol-3-phosphate transport system permease UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 
 0.577
APG92084.1
ABC transporter permease y4oR; Region:COG0395G.
 
 0.574
APG89511.1
ABC transporter permease; Region:COG0395G.
 
 0.551
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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