STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG92721.1Deaminase; Region:COG0590J. (201 aa)    
Predicted Functional Partners:
hisE
phosphoribosyl-ATP pyrophosphatase HisE; Region:COG0140E.
   
    0.642
APG92720.1
Xanthine-uracil permease; Region:COG2233F.
       0.548
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.509
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.475
birA
Biotin transcriptional regulator bifunctional protein BirA; Region:COG0340H.
  
    0.458
APG89744.1
Peptidase M22, glycoprotease; Region:COG1214J.
  
  
 0.428
xthA
Exodeoxyribonuclease III; Region:COG0708L.
   
 
 0.407
xthA-2
Exodeoxyribonuclease III; Region:COG0708L.
   
 
 0.407
APG90468.1
Hypothetical protein; Region:COG0346Q.
  
    0.406
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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