STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galMAldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (348 aa)    
Predicted Functional Partners:
gal
Galactose 1-dehydrogenase Gal; Region:COG0673R.
  
 
 0.917
glk
Glucokinase; Region:COG0837G; Belongs to the bacterial glucokinase family.
    
 0.914
bacC
Bacilysin biosynthesis oxidoreductase BacC; Region:COG1028IQR.
   
 
 0.902
galE
UDP-glucose 4-epimerase protein; Region:COG1087M; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.779
metA
Homoserine O-succinyltransferase MetA; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
       0.676
APG92815.1
Hypothetical protein; Region:COG3825S.
       0.669
xylA
Xylose isomerase XylA; Region:COG2115G; Belongs to the xylose isomerase family.
 
  
 0.526
xylB
Xylulose kinase XylB; Region:COG1070G.
 
  
 0.441
abg
Beta-glucosidase Abg; Region:COG2723G.
 
  
 0.430
araB
Ribulokinase 2; Region:COG1069G.
 
   
 0.424
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.