APG92834.1 protein (Sinorhizobium americanum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

APG92834.1

Cyclic nucleotide-binding protein; Region:COG0664T. (151 aa)

Predicted Functional Partners:

cya-20

0.836

cya-6

0.835

cya-22

0.835

cya-5

0.833

rpoD

0.815

rpoA

0.809

rpoC

0.775

rpoB

0.774

rpoZ

0.759

APG92835.1

0.733

Your Current Organism:

Sinorhizobium americanum

NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APG92834.1	APG92835.1	SAMCFNEI73_Ch3584	SAMCFNEI73_Ch3585	Cyclic nucleotide-binding protein; Region:COG0664T.	Transcriptional regulatory protein YvrH; Region:COG0745TK.	0.733
APG92834.1	cya-20	SAMCFNEI73_Ch3584	SAMCFNEI73_Ch3103	Cyclic nucleotide-binding protein; Region:COG0664T.	Adenylate cyclase; Region:COG0457R.	0.836
APG92834.1	cya-22	SAMCFNEI73_Ch3584	SAMCFNEI73_Ch3185	Cyclic nucleotide-binding protein; Region:COG0664T.	Adenylate cyclase; Region:COG0457R.	0.835
APG92834.1	cya-5	SAMCFNEI73_Ch3584	SAMCFNEI73_Ch1243	Cyclic nucleotide-binding protein; Region:COG0664T.	Adenylate cyclase; Region:COG0457R.	0.833
APG92834.1	cya-6	SAMCFNEI73_Ch3584	SAMCFNEI73_Ch1798	Cyclic nucleotide-binding protein; Region:COG0664T.	Adenylate cyclase; Region:COG0457R.	0.835
APG92834.1	rpoA	SAMCFNEI73_Ch3584	SAMCFNEI73_Ch1502	Cyclic nucleotide-binding protein; Region:COG0664T.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.809
APG92834.1	rpoB	SAMCFNEI73_Ch3584	SAMCFNEI73_Ch1470	Cyclic nucleotide-binding protein; Region:COG0664T.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.774
APG92834.1	rpoC	SAMCFNEI73_Ch3584	SAMCFNEI73_Ch1471	Cyclic nucleotide-binding protein; Region:COG0664T.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.775
APG92834.1	rpoD	SAMCFNEI73_Ch3584	SAMCFNEI73_Ch2608	Cyclic nucleotide-binding protein; Region:COG0664T.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.815
APG92834.1	rpoZ	SAMCFNEI73_Ch3584	SAMCFNEI73_Ch1134	Cyclic nucleotide-binding protein; Region:COG0664T.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.759
APG92835.1	APG92834.1	SAMCFNEI73_Ch3585	SAMCFNEI73_Ch3584	Transcriptional regulatory protein YvrH; Region:COG0745TK.	Cyclic nucleotide-binding protein; Region:COG0664T.	0.733
APG92835.1	rpoA	SAMCFNEI73_Ch3585	SAMCFNEI73_Ch1502	Transcriptional regulatory protein YvrH; Region:COG0745TK.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.579
APG92835.1	rpoB	SAMCFNEI73_Ch3585	SAMCFNEI73_Ch1470	Transcriptional regulatory protein YvrH; Region:COG0745TK.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.522
APG92835.1	rpoC	SAMCFNEI73_Ch3585	SAMCFNEI73_Ch1471	Transcriptional regulatory protein YvrH; Region:COG0745TK.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.518
APG92835.1	rpoZ	SAMCFNEI73_Ch3585	SAMCFNEI73_Ch1134	Transcriptional regulatory protein YvrH; Region:COG0745TK.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.451
cya-20	APG92834.1	SAMCFNEI73_Ch3103	SAMCFNEI73_Ch3584	Adenylate cyclase; Region:COG0457R.	Cyclic nucleotide-binding protein; Region:COG0664T.	0.836
cya-20	cya-22	SAMCFNEI73_Ch3103	SAMCFNEI73_Ch3185	Adenylate cyclase; Region:COG0457R.	Adenylate cyclase; Region:COG0457R.	0.493
cya-20	cya-5	SAMCFNEI73_Ch3103	SAMCFNEI73_Ch1243	Adenylate cyclase; Region:COG0457R.	Adenylate cyclase; Region:COG0457R.	0.483
cya-20	cya-6	SAMCFNEI73_Ch3103	SAMCFNEI73_Ch1798	Adenylate cyclase; Region:COG0457R.	Adenylate cyclase; Region:COG0457R.	0.504
cya-20	rpoA	SAMCFNEI73_Ch3103	SAMCFNEI73_Ch1502	Adenylate cyclase; Region:COG0457R.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.490

page 1 of 4

Server load: medium (60%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2026

Credits

Access

Info

About