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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thiPThiamine transport system permease ThiP; Region:COG1178P. (540 aa)    
Predicted Functional Partners:
thiB
Thiamine-binding periplasmic protein ThiB; Region:COG4143H.
 
 
 0.994
thiQ
Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.
 
 
 0.989
APG91614.1
ABC transporter substrate-binding protein; Region:COG1840P.
 
  
 0.661
futA
Iron uptake protein A1; Region:COG1840P.
  
  
 0.611
APG91625.1
ABC transporter substrate-binding protein; Region:COG1840P.
  
  
 0.611
APG91784.1
Periplasmic binding ABC transporter; Region:COG1840P.
  
  
 0.611
fhuC
Iron(3+)-hydroxamate import ATP-binding protein FhuC; Region:COG1120PH.
   
  
 0.486
APG92886.1
Peptidase M48, Ste24p; Region:COG4784R.
       0.463
APG92881.1
Thiamine pyrophosphokinase; Region:COG1564H.
 
     0.443
APG91818.1
Iron ABC transport system, solute-binding protein; Region:COG0614P.
   
  
 0.431
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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