STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndvABeta-(1-->2)glucan export ATP-binding/permease protein NdvA; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (580 aa)    
Predicted Functional Partners:
APG89897.1
Erythronolide synthase, modules 3 and 4; Region:COG0236IQ.
  
 0.779
msbA-2
Lipid A export ATP-binding/permease protein MsbA; Region:COG5265O.
  
 
0.714
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.565
APG89858.1
Peptidoglycan-binding protein.
 
 0.557
APG91970.1
Hypothetical protein; Region:COG0464MDT.
   
 0.549
ndvB
Protein NdvB; Region:COG3459G.
 
 
 0.548
APG92464.1
Sel1 domain-containing protein repeat-containing protein; Region:COG0790T.
  
  
  0.522
APG91280.1
DNA polymerase III subunit delta; Region:COG0470L.
 
  
 0.500
APG89437.1
ABC transporter ATP-binding protein YfiL; Region:COG1131V.
 
0.484
tcyC
L-cystine import ATP-binding protein TcyC; Region:COG1126E.
 
    
0.482
Your Current Organism:
Sinorhizobium americanum
NCBI taxonomy Id: 194963
Other names: ATCC BAA-532, CIP 108390, DSM 15007, Ensifer americanum, Ensifer americanus, Ensifer americanus corrig. (Toledo et al. 2003) Wang et al. 2015, Ensifer sp. AC14c, Ensifer sp. CFNEI 156, S. americanum, Sinorhizobium americanum Toledo et al. 2004, Sinorhizobium americanus, Sinorhizobium sp. CFNEI 156, Sinorhizobium sp. CFNEI 54, strain CFNEI 156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.