STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysQ_13'(2'),5'-bisphosphate nucleotidase CysQ. (247 aa)    
Predicted Functional Partners:
cysC
Adenylyl-sulfate kinase.
 
 0.997
cysD
Sulfate adenylyltransferase subunit 2.
 
 
 0.987
cysN
Sulfate adenylyltransferase subunit 1.
    
 0.979
cysQ_2
3'(2'),5'-bisphosphate nucleotidase CysQ.
  
  
 
0.921
sat
Sulfate adenylyltransferase.
    
 0.912
ALU98890.1
Putative transporter.
 
     0.833
ALU98892.1
Sulfotransferase family protein.
       0.763
yjjG
Pyrimidine 5'-nucleotidase YjjG.
       0.658
rmlB
dTDP-glucose 4,6-dehydratase.
  
    0.645
ALU98893.1
Hypothetical protein.
       0.642
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.