Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
ALU98940.1Formate hydrogenlyase complex iron-sulfur subunit. (553 aa)    
Predicted Functional Partners:
fdhA
Formate dehydrogenase subunit alpha precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 
 0.942
napD
NapD protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
  
 0.894
fdnG
Formate dehydrogenase, nitrate-inducible, major subunit precursor.
 
  
 0.828
fdhB1
Formate dehydrogenase iron-sulfur subunit.
 
  
 0.818
fdoI
Formate dehydrogenase, cytochrome b556(fdo) subunit.
 
     0.812
selB
Selenocysteine-specific elongation factor.
 
     0.687
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
       0.631
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.575
ALU98943.1
Disulfide isomerase/thiol-disulfide oxidase.
       0.480
ALU98944.1
Hypothetical protein.
       0.452
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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