STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU98994.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
ALU98995.1
Hypothetical protein.
      0.960
ALU98996.1
Hypothetical protein.
  
    0.752
lvr
Levodione reductase; Required for biosynthesis of LAH modification in the post- translational modification of Campylobacter coli flagellin.
   
   0.704
hddC
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
    0.671
legI
N,N'-diacetyllegionaminic acid synthase.
     
 0.670
ALV00578.1
Diadenosine tetraphosphatase.
   
   0.670
legF_2
CMP-N,N'-diacetyllegionaminic acid synthase; Required for biosynthesis of LAH modification in the post- translational modification of Campylobacter coli flagellin.
       0.667
ALU98990.1
Hypothetical protein.
       0.667
legG
GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolyzing).
       0.654
maf-2
Hypothetical protein.
       0.648
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.