Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
maf1Hypothetical protein. (640 aa)    
Predicted Functional Partners:
flaA_2
Flagellin A; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.894
pseI
Pseudaminic acid synthase.
 
     0.861
flaA_1
Flagellin A; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.803
maf
Septum formation protein Maf; Belongs to the Maf family.
      
 0.775
epsN
Putative pyridoxal phosphate-dependent aminotransferase EpsN; Belongs to the DegT/DnrJ/EryC1 family.
       0.773
rmd
GDP-6-deoxy-D-mannose reductase.
       0.773
flaA_3
Flagellin A; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.760
csrA
Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.
  
     0.605
flaB2
Flagellar filament 31.3 kDa core protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.580
ALU98975.1
Hypothetical protein.
  
     0.569
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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