Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pseIPseudaminic acid synthase. (343 aa)    
Predicted Functional Partners:
pseG
UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase.
 
 
 0.997
legF_3
CMP-N,N'-diacetyllegionaminic acid synthase.
 
 
 0.967
pseB
UDP-N-acetylglucosamine 4,6-dehydratase (inverting).
 
  
 0.929
pseC
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.910
pseH
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase.
 
  
 0.901
maf1
Hypothetical protein.
 
     0.861
legG
GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolyzing).
 
  
 0.802
epsN
Putative pyridoxal phosphate-dependent aminotransferase EpsN; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.796
pseD
Hypothetical protein.
 
   
 0.788
rmd
GDP-6-deoxy-D-mannose reductase.
  
    0.788
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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