Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALU99069.1Putative tautomerase; Belongs to the 4-oxalocrotonate tautomerase family. (69 aa)    
Predicted Functional Partners:
ALV00361.1
Putative tautomerase; Belongs to the 4-oxalocrotonate tautomerase family.
  
  
 
0.912
hup
DNA-binding protein HU; Belongs to the bacterial histone-like protein family.
   
 
 0.780
ALU99324.1
Cytochrome c.
      
 0.584
ynfM
Inner membrane transport protein YnfM.
      
 0.583
iscU
NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
     
 0.525
cyf_1
Cytochrome c-553 precursor.
      
 0.485
cyf_2
Cytochrome c-553 precursor.
      
 0.485
ALV00494.1
Hypothetical protein.
      
 0.480
mmpA
Metalloprotease MmpA.
      
 0.475
ALU99070.1
Hypothetical protein.
       0.457
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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