STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kefCGlutathione-regulated potassium-efflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (540 aa)    
Predicted Functional Partners:
ktrB
Ktr system potassium uptake protein B.
  
 
 0.928
cbpA
Curved DNA-binding protein.
 
 
 
 0.872
hspR
Putative heat shock protein HspR.
  
  
 0.851
gph_3
Phosphoglycolate phosphatase.
       0.810
ALU99096.1
Hypothetical protein.
       0.810
ywrO
General stress protein 14.
 
 
 0.794
glyS
Glycine--tRNA ligase beta subunit.
       0.675
ALU99092.1
Hypothetical protein.
       0.669
degP
Periplasmic serine endoprotease DegP precursor; Belongs to the peptidase S1C family.
 
   
 0.666
cpxA
Sensor protein CpxA.
 
  
 0.640
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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