STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mprA_2Response regulator MprA. (221 aa)    
Predicted Functional Partners:
baeS
Signal transduction histidine-protein kinase BaeS.
 
 
 0.980
phoR
Phosphate regulon sensor protein PhoR.
 
 
 0.862
zraS_1
Sensor protein ZraS.
 
 
 
 0.850
zraS_2
Sensor protein ZraS.
 
 
 0.797
cpxA
Sensor protein CpxA.
 
 
 0.794
cheY
Chemotaxis protein CheY homolog.
  
     0.753
rssA
Swarming motility regulation sensor protein RssA.
 
 
 0.748
cheA
Chemotaxis protein CheA.
  
 
 0.713
ALU99109.1
Hypothetical protein.
   
   0.572
ALU99110.1
Bacteriohemerythrin.
       0.538
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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