STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
artPArginine-binding extracellular protein ArtP precursor; Belongs to the bacterial solute-binding protein 3 family. (256 aa)    
Predicted Functional Partners:
artQ
Arginine transport system permease protein ArtQ.
  0.996
glnP_1
Putative glutamine ABC transporter permease protein GlnP.
   0.980
glnM_2
Putative glutamine ABC transporter permease protein GlnM.
   0.980
glnM_1
Putative glutamine ABC transporter permease protein GlnM.
 
   0.979
yecS
Inner membrane amino-acid ABC transporter permease protein YecS.
   0.979
glnQ_2
Glutamine transport ATP-binding protein GlnQ.
 
  0.963
glnP_2
Putative glutamine ABC transporter permease protein GlnP.
 
   0.952
glnQ_3
Glutamine transport ATP-binding protein GlnQ.
 
   0.802
glnQ_1
Glutamine transport ATP-binding protein GlnQ.
 
   0.798
fliL
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.445
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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