Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
potASpermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily. (329 aa)    
Predicted Functional Partners:
phnV
Putative 2-aminoethylphosphonate transport system permease protein PhnV.
 0.998
potH
Putrescine transport system permease protein PotH.
 
 
 0.994
sbp
Sulfate-binding protein precursor.
 
 0.993
oppD
Oligopeptide transport ATP-binding protein OppD.
 
    
0.917
cysW_2
Sulfate transport system permease protein CysW; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.895
ALU99601.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
 
    0.893
dppC
Dipeptide transport system permease protein DppC.
      0.872
ALU99597.1
Haloacid dehalogenase-like hydrolase.
       0.782
ALU99602.1
Hypothetical protein.
       0.773
ALV00508.1
Molybdate ABC transporter permease protein.
 
 
 0.736
Your Current Organism:
Campylobacter coli
NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]
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