rpoN protein (Campylobacter coli) - STRING interaction network

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Score

rpoN

RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (416 aa)

Predicted Functional Partners:

rpoBC_1

0.913

rpoBC_2

0.913

rpoA

0.878

rpoZ

0.868

rpoD

0.850

fliA

0.846

lptB_2

0.833

glnG

0.830

tsaE

0.829

flaA_2

0.821

Your Current Organism:

Campylobacter coli

NCBI taxonomy Id: 195
Other names: ATCC 33559, C. coli, CCUG 11283, CCUG 14540, CCUG:33450 [[Campylobacter hyoilei]], CIP 70.80, CIP 7080, Campylobacter hyoilei, Campylobacter sp. OH-18-18281-4B, Campylobacter sp. OH-18-7816, DSM 4689, JCM 2529, LMG 6440, LMG 9860, LMG:6440, LMG:9860, NCTC 11366, Vibrio coli, strain RMIT 32A [[Campylobacter hyoilei]]

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
flaA_2	fliA	ATE51_00888	ATE51_00128	Flagellin A; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	RNA polymerase sigma factor FliA; Belongs to the sigma-70 factor family.	0.962
flaA_2	rpoD	ATE51_00888	ATE51_01626	Flagellin A; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.513
flaA_2	rpoN	ATE51_00888	ATE51_02264	Flagellin A; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.821
fliA	flaA_2	ATE51_00128	ATE51_00888	RNA polymerase sigma factor FliA; Belongs to the sigma-70 factor family.	Flagellin A; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.	0.962
fliA	rpoA	ATE51_00128	ATE51_00356	RNA polymerase sigma factor FliA; Belongs to the sigma-70 factor family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.886
fliA	rpoBC_1	ATE51_00128	ATE51_03246	RNA polymerase sigma factor FliA; Belongs to the sigma-70 factor family.	Bifunctional DNA-directed RNA polymerase subunit beta-beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.912
fliA	rpoBC_2	ATE51_00128	ATE51_03248	RNA polymerase sigma factor FliA; Belongs to the sigma-70 factor family.	Bifunctional DNA-directed RNA polymerase subunit beta-beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.912
fliA	rpoD	ATE51_00128	ATE51_01626	RNA polymerase sigma factor FliA; Belongs to the sigma-70 factor family.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.422
fliA	rpoN	ATE51_00128	ATE51_02264	RNA polymerase sigma factor FliA; Belongs to the sigma-70 factor family.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.846
fliA	rpoZ	ATE51_00128	ATE51_02416	RNA polymerase sigma factor FliA; Belongs to the sigma-70 factor family.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.873
glnG	rpoN	ATE51_01572	ATE51_02264	Nitrogen regulation protein NR(I).	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.830
lptB_2	rpoN	ATE51_02266	ATE51_02264	Lipopolysaccharide export system ATP-binding protein LptB.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.833
lptB_2	tsaE	ATE51_02266	ATE51_02268	Lipopolysaccharide export system ATP-binding protein LptB.	tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.	0.817
rpoA	fliA	ATE51_00356	ATE51_00128	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor FliA; Belongs to the sigma-70 factor family.	0.886
rpoA	rpoBC_1	ATE51_00356	ATE51_03246	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Bifunctional DNA-directed RNA polymerase subunit beta-beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoBC_2	ATE51_00356	ATE51_03248	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Bifunctional DNA-directed RNA polymerase subunit beta-beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoD	ATE51_00356	ATE51_01626	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.957
rpoA	rpoN	ATE51_00356	ATE51_02264	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.878
rpoA	rpoZ	ATE51_00356	ATE51_02416	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.988
rpoBC_1	fliA	ATE51_03246	ATE51_00128	Bifunctional DNA-directed RNA polymerase subunit beta-beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma factor FliA; Belongs to the sigma-70 factor family.	0.912

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